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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_2139Hypothetical protein. (225 aa)    
Predicted Functional Partners:
BISU_0754
G5 domain-containing protein.
  
     0.752
BISU_1330
Hypothetical protein.
  
     0.709
BISU_0055
Lytic transglycosylase.
  
     0.703
BISU_2140
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.692
BISU_1809
Hypothetical protein.
  
     0.670
BISU_0369
Membrane protein.
  
     0.614
BISU_1557
Glycosyltransferase.
  
     0.608
BISU_1558
Hypothetical protein.
  
     0.605
BISU_0514
Membrane protein.
  
     0.582
BISU_0335
Hypothetical protein.
  
     0.568
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.