STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_2464Galactosyl transferase CpsD. (416 aa)    
Predicted Functional Partners:
BISU_1244
Etk-like tyrosine kinase.
 
 
 0.953
BISU_0214
dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.737
BISU_0224
Glycosyl transferase family 2.
 
 
 0.698
BISU_2466
Glycosyltransferase family 1.
 
    0.698
BISU_2467
Glycosyltransferase family 1.
 
    0.689
BISU_1450
Guanylyltransferase.
 
 
 0.656
BISU_1982
Guanylyltransferase.
 
 
 0.655
BISU_2470
Glycosyl transferase.
 
    0.654
BISU_2468
Glycosyl transferase family 2.
 
    0.581
BISU_0210
Family 2 glycosyl transferase.
  
 
 0.576
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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