STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000000427Claudin 1. (215 aa)    
Predicted Functional Partners:
ENSEBUP00000005264
Occludin a.
     
 0.816
ENSEBUP00000005013
Tight junction protein 2a (zona occludens 2).
   
 0.814
ENSEBUP00000005651
Tight junction protein 1a.
   
 0.814
ENSEBUP00000027606
annotation not available
   
 0.814
ENSEBUP00000026998
Claudin 17.
  
  
0.796
ENSEBUP00000005040
annotation not available
  
  
 
0.791
ENSEBUP00000002059
annotation not available
   
 
 0.786
ENSEBUP00000014726
annotation not available
  
 
0.776
ENSEBUP00000005802
Claudin e.
  
 
0.770
ENSEBUP00000002519
annotation not available
  
 
 
0.735
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.