ENSEBUP00000000697 protein (Eptatretus burgeri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSEBUP00000000697

annotation not available (203 aa)

Predicted Functional Partners:

ENSEBUP00000020956

0.757

GNA11

0.743

ENSEBUP00000015484

0.741

GNAZ

0.737

ENSEBUP00000015660

0.736

ENSEBUP00000005418

0.723

ENSEBUP00000008094

0.723

GNAI2

0.723

ENSEBUP00000025192

0.723

GNAI2-2

0.723

Your Current Organism:

Eptatretus burgeri

NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEBUP00000000697	ENSEBUP00000005418	ENSEBUP00000000697	ENSEBUP00000005418	annotation not available	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	0.723
ENSEBUP00000000697	ENSEBUP00000008094	ENSEBUP00000000697	ENSEBUP00000008094	annotation not available	annotation not available	0.723
ENSEBUP00000000697	ENSEBUP00000015484	ENSEBUP00000000697	ENSEBUP00000015484	annotation not available	annotation not available	0.741
ENSEBUP00000000697	ENSEBUP00000015660	ENSEBUP00000000697	ENSEBUP00000015660	annotation not available	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.736
ENSEBUP00000000697	ENSEBUP00000020956	ENSEBUP00000000697	ENSEBUP00000020956	annotation not available	Glycogen synthase kinase 3 alpha b.	0.757
ENSEBUP00000000697	ENSEBUP00000025192	ENSEBUP00000000697	ENSEBUP00000025192	annotation not available	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.723
ENSEBUP00000000697	GNA11	ENSEBUP00000000697	ENSEBUP00000016477	annotation not available	G protein subunit alpha 11.	0.743
ENSEBUP00000000697	GNAI2	ENSEBUP00000000697	ENSEBUP00000019340	annotation not available	G protein subunit alpha i2.	0.723
ENSEBUP00000000697	GNAI2-2	ENSEBUP00000000697	ENSEBUP00000027497	annotation not available	G protein subunit alpha i2.	0.723
ENSEBUP00000000697	GNAZ	ENSEBUP00000000697	ENSEBUP00000010562	annotation not available	G protein subunit alpha z.	0.737
ENSEBUP00000005418	ENSEBUP00000000697	ENSEBUP00000005418	ENSEBUP00000000697	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	annotation not available	0.723
ENSEBUP00000005418	ENSEBUP00000015484	ENSEBUP00000005418	ENSEBUP00000015484	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	annotation not available	0.851
ENSEBUP00000005418	ENSEBUP00000015660	ENSEBUP00000005418	ENSEBUP00000015660	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.633
ENSEBUP00000005418	GNA11	ENSEBUP00000005418	ENSEBUP00000016477	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	G protein subunit alpha 11.	0.690
ENSEBUP00000005418	GNAZ	ENSEBUP00000005418	ENSEBUP00000010562	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	G protein subunit alpha z.	0.478
ENSEBUP00000008094	ENSEBUP00000000697	ENSEBUP00000008094	ENSEBUP00000000697	annotation not available	annotation not available	0.723
ENSEBUP00000008094	ENSEBUP00000015484	ENSEBUP00000008094	ENSEBUP00000015484	annotation not available	annotation not available	0.851
ENSEBUP00000008094	ENSEBUP00000015660	ENSEBUP00000008094	ENSEBUP00000015660	annotation not available	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.632
ENSEBUP00000008094	GNA11	ENSEBUP00000008094	ENSEBUP00000016477	annotation not available	G protein subunit alpha 11.	0.696
ENSEBUP00000008094	GNAZ	ENSEBUP00000008094	ENSEBUP00000010562	annotation not available	G protein subunit alpha z.	0.477