STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000001035poly(A) binding protein, cytoplasmic 4 (inducible form). (626 aa)    
Predicted Functional Partners:
ENSEBUP00000015398
Eukaryotic translation initiation factor 4A1B.
   
 0.963
ENSEBUP00000019695
poly(A) specific ribonuclease subunit PAN3.
    
 0.960
ENSEBUP00000004035
poly(A) specific ribonuclease subunit PAN2.
    
 0.952
ENSEBUP00000002419
annotation not available
   
 0.923
ENSEBUP00000003951
annotation not available
   
 0.882
ENSEBUP00000023982
Eukaryotic translation initiation factor 4E family member 1B.
   
 0.882
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.878
ENSEBUP00000006708
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.861
ENSEBUP00000021069
annotation not available
    
 0.860
ENSEBUP00000025278
Coactivator-associated arginine methyltransferase 1.
    
 
 0.835
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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