STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000001790Transmembrane protein 183A. (326 aa)    
Predicted Functional Partners:
ENSEBUP00000006051
Tubulin, gamma complex associated protein 2.
    
 0.939
ENSEBUP00000014930
Tubulin, gamma 1.
    
 0.921
ENSEBUP00000027558
Tubulin, gamma complex associated protein 3.
    
 0.908
ENSEBUP00000011318
Mitotic spindle organizing protein 1.
     
 0.898
ENSEBUP00000018349
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.868
ENSEBUP00000001858
annotation not available
    
 0.706
ENSEBUP00000017552
annotation not available
     
 0.682
ENSEBUP00000008825
Synapsin IIa.
    
 0.642
ENSEBUP00000009176
Synapsin IIa.
    
 0.642
ENSEBUP00000014065
annotation not available
     
 0.639
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.