STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000002322annotation not available (384 aa)    
Predicted Functional Partners:
ENSEBUP00000005329
Ribosome production factor 2 homolog.
   
 
 0.951
ENSEBUP00000012282
FtsJ RNA 2'-O-methyltransferase 3.
   
  0.912
ENSEBUP00000009439
NOC2-like nucleolar associated transcriptional repressor.
   
  0.899
ENSEBUP00000026773
WD repeat domain 74.
   
  0.899
ENSEBUP00000009760
annotation not available
   
 
 0.898
ENSEBUP00000016303
Pescadillo.
   
  0.894
ENSEBUP00000004935
BOP1 ribosomal biogenesis factor.
   
  0.888
ENSEBUP00000014074
annotation not available
   
  0.888
ENSEBUP00000025260
annotation not available
   
  0.888
ENSEBUP00000016807
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.885
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.