STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000002462nudC nuclear distribution protein. (324 aa)    
Predicted Functional Partners:
ENSEBUP00000015996
RAN binding protein 2.
   
 0.975
ENSEBUP00000002701
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.957
ENSEBUP00000008312
nudE neurodevelopment protein 1.
     
 0.907
ENSEBUP00000018633
annotation not available
     
 0.872
ENSEBUP00000007820
annotation not available
     
 0.856
ENSEBUP00000024576
annotation not available
   
 0.833
ENSEBUP00000024480
annotation not available
     
 0.817
ENSEBUP00000007814
annotation not available
   
 
 0.805
ENSEBUP00000027799
annotation not available
     
 0.804
ENSEBUP00000020519
RAN GTPase activating protein 1a.
   
 
  0.802
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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