STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000002482Chromosome 9 open reading frame 78. (282 aa)    
Predicted Functional Partners:
ENSEBUP00000010303
pre-mRNA processing factor 8.
    
 
 0.925
ENSEBUP00000003014
NFKB activating protein.
   
 
  0.877
ENSEBUP00000005353
SLU7 homolog, splicing factor.
   
 
 0.868
ENSEBUP00000003060
Mediator complex subunit 22.
   
  
 0.864
ENSEBUP00000025187
annotation not available
    
 
 0.852
ENSEBUP00000026846
annotation not available
    
 
 0.852
ENSEBUP00000011425
Family with sequence similarity 50 member A.
    
 0.838
ENSEBUP00000024944
SYF2 pre-mRNA-splicing factor.
   
 
 0.818
ENSEBUP00000018733
annotation not available
    
  0.817
ENSEBUP00000020286
annotation not available
   
  
 0.810
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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