STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000002804ATG16 autophagy related 16-like 1 (S. cerevisiae). (395 aa)    
Predicted Functional Partners:
ENSEBUP00000014281
ATG5 autophagy related 5 homolog (S. cerevisiae).
   
 0.999
ATG12
Autophagy related 12.
    
 0.998
ENSEBUP00000014294
annotation not available
    
 0.993
ENSEBUP00000015828
Autophagy related 3.
   
 0.990
ENSEBUP00000026061
annotation not available
   
 0.983
ENSEBUP00000026209
WD repeat domain, phosphoinositide interacting 2.
   
 0.983
ENSEBUP00000000636
Beclin 1, autophagy related.
    
 0.947
ENSEBUP00000000783
Nucleotide-binding oligomerization domain containing 2.
    
 0.922
ENSEBUP00000002284
Phosphoinositide-3-kinase, regulatory subunit 4.
     
 0.905
ENSEBUP00000002422
annotation not available
    
 0.905
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.