STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000003157Vacuole membrane protein 1. (354 aa)    
Predicted Functional Partners:
ENSEBUP00000000636
Beclin 1, autophagy related.
    
 0.917
ENSEBUP00000005012
ATG13 autophagy related 13 homolog (S. cerevisiae).
     
 0.888
ENSEBUP00000001000
annotation not available
     
 0.806
ENSEBUP00000017412
Transmembrane protein 41B.
    
 0.623
ATG12
Autophagy related 12.
      
 0.592
ENSEBUP00000002138
Autophagy related 9B.
      
 0.591
ENSEBUP00000014281
ATG5 autophagy related 5 homolog (S. cerevisiae).
      
 0.588
ENSEBUP00000007625
ATG7 autophagy related 7 homolog (S. cerevisiae).
   
  
 0.583
ENSEBUP00000002605
EI24 autophagy associated transmembrane protein.
      
 0.573
ATG2B
Autophagy related 2B.
      
 0.554
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.