STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000003243annotation not available (732 aa)    
Predicted Functional Partners:
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
    
 
 0.872
ENSEBUP00000023636
UV radiation resistance associated gene.
    
 0.858
ENSEBUP00000026584
VPS39 subunit of HOPS complex.
    
 
 0.649
ENSEBUP00000011612
VPS11 core subunit of CORVET and HOPS complexes.
    
 
 0.641
ENSEBUP00000012268
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.596
ENSEBUP00000004812
annotation not available
    
 
 0.541
ENSEBUP00000008872
Osteoclastogenesis associated transmembrane protein 1.
      
 0.532
ENSEBUP00000000636
Beclin 1, autophagy related.
    
 
 0.522
ENSEBUP00000026469
Synaptosome associated protein 29.
      
 0.499
ENSEBUP00000009938
annotation not available
    
 
 0.485
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.