STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000003611Ribosomal RNA processing 8. (583 aa)    
Predicted Functional Partners:
ENSEBUP00000000924
Bystin-like.
   
 0.988
ENSEBUP00000009439
NOC2-like nucleolar associated transcriptional repressor.
   
 0.983
ENSEBUP00000021148
annotation not available
   
  0.976
ENSEBUP00000027040
annotation not available
   
 
 0.971
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.965
ENSEBUP00000004441
PWP2 small subunit processome component.
   
 
  0.963
ENSEBUP00000022558
Karyopherin (importin) beta 1.
    
   0.962
ENSEBUP00000000048
annotation not available
   
  0.961
ENSEBUP00000016303
Pescadillo.
   
 
  0.961
ENSEBUP00000008361
annotation not available
   
  0.959
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.