STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000004185Charged multivesicular body protein 5a. (219 aa)    
Predicted Functional Partners:
ENSEBUP00000007746
Vesicle (multivesicular body) trafficking 1.
   
 0.999
ENSEBUP00000012419
Charged multivesicular body protein 1A.
   
 0.983
ENSEBUP00000024674
annotation not available
   
 0.983
ENSEBUP00000000560
annotation not available
  
0.981
ENSEBUP00000002380
Charged multivesicular body protein 3.
   
 0.980
ENSEBUP00000010729
Charged multivesicular body protein 2A.
   
 0.979
ENSEBUP00000014318
annotation not available
   
 0.979
ENSEBUP00000014366
IST1 factor associated with ESCRT-III.
    
 
 0.978
ENSEBUP00000009815
Charged multivesicular body protein 2A.
   
 0.972
ENSEBUP00000017864
Transmembrane 9 superfamily member 1.
   
 0.968
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.