STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000004631Mitochondrial ribosomal protein L48. (194 aa)    
Predicted Functional Partners:
ENSEBUP00000018252
Mitochondrial ribosomal protein L51.
   
 
 0.975
ENSEBUP00000022040
Mitochondrial ribosomal protein L30.
   
 
 0.970
ENSEBUP00000026995
Mitochondrial ribosomal protein L4.
   
 
 0.968
ENSEBUP00000014280
Mitochondrial ribosomal protein L46.
   
   0.965
ENSEBUP00000026917
Mitochondrial ribosomal protein S30.
   
   0.963
ENSEBUP00000001747
Mitochondrial ribosomal protein L39.
   
   0.959
ENSEBUP00000008669
Mitochondrial ribosomal protein L42.
   
 
 0.958
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.957
ENSEBUP00000023057
Mitochondrial ribosomal protein L47.
   
   0.956
ENSEBUP00000000446
annotation not available
   
   0.955
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.