STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000004916annotation not available (596 aa)    
Predicted Functional Partners:
ENSEBUP00000015773
annotation not available
    
 0.812
ENSEBUP00000022754
annotation not available
    
 0.812
ENSEBUP00000001403
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.791
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.791
ENSEBUP00000004295
annotation not available
    
 0.747
ENSEBUP00000012870
annotation not available
    
 0.715
ENSEBUP00000003866
Polymerase (DNA directed), epsilon 3 (p17 subunit).
     
 0.698
ENSEBUP00000017350
annotation not available
     
 0.696
ENSEBUP00000014487
annotation not available
    
 0.691
ENSEBUP00000002233
annotation not available
   
 
 0.659
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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