STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000005732RUN and FYVE domain containing 3. (333 aa)    
Predicted Functional Partners:
ENSEBUP00000023636
UV radiation resistance associated gene.
    
 0.822
ENSEBUP00000026793
RAB4B, member RAS oncogene family.
    
  0.667
ENSEBUP00000000636
Beclin 1, autophagy related.
    
 
 0.478
ENSEBUP00000027034
Vacuolar protein sorting 45 homolog.
     
 0.446
ENSEBUP00000009938
annotation not available
    
 
 0.435
ENSEBUP00000023295
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 
 0.435
ENSEBUP00000021479
RUN and FYVE domain containing 2.
  
 
  
0.434
ENSEBUP00000003243
annotation not available
     
0.427
ENSEBUP00000005514
annotation not available
     
 0.424
ENSEBUP00000012274
annotation not available
    
   0.410
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.