STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000005916Charged multivesicular body protein 2Bb. (255 aa)    
Predicted Functional Partners:
ENSEBUP00000017864
Transmembrane 9 superfamily member 1.
   
 0.973
ENSEBUP00000024328
Transmembrane 9 superfamily member 1.
   
 0.973
ENSEBUP00000002380
Charged multivesicular body protein 3.
   
0.961
ENSEBUP00000010729
Charged multivesicular body protein 2A.
   
0.949
ENSEBUP00000000560
annotation not available
    
 0.929
ENSEBUP00000014318
annotation not available
    
 0.929
ENSEBUP00000012419
Charged multivesicular body protein 1A.
   
 0.925
ENSEBUP00000024674
annotation not available
   
 0.925
ENSEBUP00000027680
annotation not available
   
 
 0.920
ENSEBUP00000001385
Charged multivesicular body protein 6a.
   
 
 0.914
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.