STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000006029annotation not available (287 aa)    
Predicted Functional Partners:
ENSEBUP00000023108
Cytochrome c oxidase assembly homolog 15 (yeast).
   
 
 0.451
ENSEBUP00000013112
annotation not available
    
 
 0.445
ENSEBUP00000018577
TraB domain containing.
    
   0.439
ENSEBUP00000008425
annotation not available
   
   0.434
ENSEBUP00000002860
SURF1 cytochrome c oxidase assembly factor.
    
 
 0.428
ENSEBUP00000002912
annotation not available
    
   0.420
ENSEBUP00000006760
annotation not available
    
   0.420
ENSEBUP00000009220
annotation not available
    
   0.420
ENSEBUP00000022169
Solute carrier family 25 member 3b.
   
 
 0.417
ENSEBUP00000011797
Cytochrome c-1.
   
 
 0.414
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.