STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000006113annotation not available (336 aa)    
Predicted Functional Partners:
ENSEBUP00000021066
annotation not available
 
      0.898
ENSEBUP00000021889
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.737
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
     
 0.719
ENSEBUP00000017326
F-box protein 8.
     
 0.622
ENSEBUP00000002827
annotation not available
     
 0.580
ENSEBUP00000002906
Cytohesin 1a.
     
 0.580
ENSEBUP00000016301
annotation not available
     
 0.580
ENSEBUP00000012272
IQ motif and Sec7 domain ArfGEF 1b.
     
 0.541
ENSEBUP00000015078
IQ motif and Sec7 domain ArfGEF 1b.
     
 0.541
ENSEBUP00000025165
annotation not available
     
 0.541
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.