STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000006204annotation not available (240 aa)    
Predicted Functional Partners:
ENSEBUP00000002308
annotation not available
  
 
0.900
ENSEBUP00000000797
pre-B-cell leukemia homeobox 1a.
    
 
 0.635
ENSEBUP00000013120
annotation not available
    
 
 0.635
ENSEBUP00000019384
annotation not available
    
 
 0.635
ENSEBUP00000012481
Homeobox B8.
  
 
0.616
ENSEBUP00000001064
annotation not available
   
 
0.607
HOXB8
Homeobox B8.
   
 
0.510
ENSEBUP00000019198
Homeobox B8.
   
 
0.510
ENSEBUP00000023126
Homeobox B5b.
   
 
0.508
ENSEBUP00000006494
Homeobox A5a.
  
 
0.445
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.