STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000006338RAB30, member RAS oncogene family. (201 aa)    
Predicted Functional Partners:
ENSEBUP00000005218
Component of oligomeric golgi complex 8.
     
 0.820
ENSEBUP00000015204
CHM Rab escort protein.
    
 0.816
ENSEBUP00000022166
annotation not available
    
 0.781
ENSEBUP00000021438
annotation not available
    
 0.767
ENSEBUP00000013556
Component of oligomeric golgi complex 1.
     
 0.763
ENSEBUP00000018424
Component of oligomeric golgi complex 2.
     
 0.760
ENSEBUP00000023190
Small integral membrane protein 7.
    
 0.758
COG5
Component of oligomeric golgi complex 5.
     
 0.758
ENSEBUP00000014171
RAB36, member RAS oncogene family.
  
  
 
0.754
ENSEBUP00000003347
Rab geranylgeranyltransferase subunit alpha.
    
  0.724
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.