STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000007395Calcium channel, voltage dependent, alpha2/delta subunit 3. (1035 aa)    
Predicted Functional Partners:
ENSEBUP00000014441
Calcium channel, voltage-dependent, gamma subunit 6b.
    
 0.974
ENSEBUP00000013142
Cache domain containing 1.
     
0.864
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
    
0.821
CACNA2D2-2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
    
0.821
ENSEBUP00000000799
annotation not available
    
 0.807
ENSEBUP00000004423
annotation not available
    
 0.807
ENSEBUP00000006511
annotation not available
    
 0.807
ENSEBUP00000009145
annotation not available
    
 0.807
ENSEBUP00000011765
annotation not available
    
 0.807
ENSEBUP00000025732
annotation not available
    
 0.807
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.