STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSEN54tRNA splicing endonuclease subunit 54. (531 aa)    
Predicted Functional Partners:
TSEN2
tRNA splicing endonuclease subunit 2.
    
 0.996
ENSEBUP00000000130
annotation not available
   
 0.968
ENSEBUP00000018654
Cleavage and polyadenylation factor I subunit 1.
    
 0.947
ENSEBUP00000016403
WSC domain containing 1b.
     
 0.873
ENSEBUP00000002500
KRI1 homolog.
   
 
  0.863
ENSEBUP00000022405
Dicer 1, ribonuclease type III.
   
 
  0.858
ENSEBUP00000005963
annotation not available
     
 0.856
ENSEBUP00000000134
Ribonuclease P/MRP 40 subunit.
     
 0.855
ENSEBUP00000026583
POP5 homolog, ribonuclease P/MRP subunit.
   
 
  0.855
ENSEBUP00000009300
Drosha ribonuclease III.
   
 
  0.854
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.