Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSEBUP00000000223 | ENSEBUP00000008082 | Cytokine induced apoptosis inhibitor 1. | Nucleotide binding protein 1 (MinD homolog, E. coli). | 0.793 |
ENSEBUP00000000223 | ENSEBUP00000009910 | Cytokine induced apoptosis inhibitor 1. | NADPH dependent diflavin oxidoreductase 1. | 0.996 |
ENSEBUP00000000223 | ENSEBUP00000010261 | Cytokine induced apoptosis inhibitor 1. | bolA family member 1. | 0.893 |
ENSEBUP00000000223 | ENSEBUP00000011393 | Cytokine induced apoptosis inhibitor 1. | Glutaredoxin 3. | 0.980 |
ENSEBUP00000000223 | ENSEBUP00000019964 | Cytokine induced apoptosis inhibitor 1. | annotation not available | 0.895 |
ENSEBUP00000000223 | ENSEBUP00000024067 | Cytokine induced apoptosis inhibitor 1. | ATP-binding cassette, sub-family B (MDR/TAP), member 7. | 0.597 |
ENSEBUP00000006190 | ENSEBUP00000008082 | Carnosine dipeptidase 2. | Nucleotide binding protein 1 (MinD homolog, E. coli). | 0.775 |
ENSEBUP00000006190 | ENSEBUP00000009910 | Carnosine dipeptidase 2. | NADPH dependent diflavin oxidoreductase 1. | 0.419 |
ENSEBUP00000006190 | ENSEBUP00000019319 | Carnosine dipeptidase 2. | NADH:ubiquinone oxidoreductase core subunit S8a. | 0.780 |
ENSEBUP00000006190 | ENSEBUP00000026547 | Carnosine dipeptidase 2. | Carnosine N-methyltransferase 1. | 0.810 |
ENSEBUP00000008082 | ENSEBUP00000000223 | Nucleotide binding protein 1 (MinD homolog, E. coli). | Cytokine induced apoptosis inhibitor 1. | 0.793 |
ENSEBUP00000008082 | ENSEBUP00000006190 | Nucleotide binding protein 1 (MinD homolog, E. coli). | Carnosine dipeptidase 2. | 0.775 |
ENSEBUP00000008082 | ENSEBUP00000009910 | Nucleotide binding protein 1 (MinD homolog, E. coli). | NADPH dependent diflavin oxidoreductase 1. | 0.822 |
ENSEBUP00000008082 | ENSEBUP00000010261 | Nucleotide binding protein 1 (MinD homolog, E. coli). | bolA family member 1. | 0.842 |
ENSEBUP00000008082 | ENSEBUP00000011393 | Nucleotide binding protein 1 (MinD homolog, E. coli). | Glutaredoxin 3. | 0.782 |
ENSEBUP00000008082 | ENSEBUP00000019319 | Nucleotide binding protein 1 (MinD homolog, E. coli). | NADH:ubiquinone oxidoreductase core subunit S8a. | 0.768 |
ENSEBUP00000008082 | ENSEBUP00000019823 | Nucleotide binding protein 1 (MinD homolog, E. coli). | Folylpolyglutamate synthase. | 0.770 |
ENSEBUP00000008082 | ENSEBUP00000019964 | Nucleotide binding protein 1 (MinD homolog, E. coli). | annotation not available | 0.838 |
ENSEBUP00000008082 | ENSEBUP00000024067 | Nucleotide binding protein 1 (MinD homolog, E. coli). | ATP-binding cassette, sub-family B (MDR/TAP), member 7. | 0.776 |
ENSEBUP00000008082 | ENSEBUP00000026547 | Nucleotide binding protein 1 (MinD homolog, E. coli). | Carnosine N-methyltransferase 1. | 0.774 |
page 1 of 3