STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000008292Prolyl 4-hydroxylase, alpha polypeptide I b. (546 aa)    
Predicted Functional Partners:
ENSEBUP00000001295
annotation not available
    
 0.725
ENSEBUP00000012553
annotation not available
    
 0.725
ENSEBUP00000026929
Prolyl 4-hydroxylase, beta polypeptide.
    
 0.725
ENSEBUP00000001467
Pyrroline-5-carboxylate reductase 3.
     
 0.719
ENSEBUP00000016388
Protein disulfide isomerase family A, member 3.
    
 0.702
ENSEBUP00000019836
Protein disulfide isomerase family A, member 4.
    
 0.702
ENSEBUP00000022729
Protein disulfide isomerase family A, member 7.
    
 0.702
ENSEBUP00000003151
annotation not available
     
 0.611
ENSEBUP00000011965
Zgc:92040.
     
 0.611
ENSEBUP00000005565
COP1 E3 ubiquitin ligase.
    
  0.552
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.