STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000008683annotation not available (768 aa)    
Predicted Functional Partners:
ENSEBUP00000005962
Catenin (cadherin-associated protein), alpha 1.
    
 0.802
CTNNB1
Catenin beta 1.
    
 0.742
CTNNB1-2
Catenin beta 1.
    
 0.742
ENSEBUP00000027798
VANGL planar cell polarity protein 2.
    
 0.674
ENSEBUP00000019693
Cadherin 17, LI cadherin (liver-intestine).
    
0.654
FAT1
FAT atypical cadherin 1.
   
0.628
FAT1-2
FAT atypical cadherin 1.
   
0.628
ENSEBUP00000005988
annotation not available
 
 
0.622
ENSEBUP00000025085
APC regulator of WNT signaling pathway.
     
 0.616
ENSEBUP00000012543
annotation not available
    
 0.614
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.