STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000008685EARP complex and GARP complex interacting protein 1. (389 aa)    
Predicted Functional Partners:
ENSEBUP00000003983
VPS51 subunit of GARP complex.
   
 0.986
ENSEBUP00000015700
VPS50 EARP/GARPII complex subunit.
    
 0.985
ENSEBUP00000000705
VPS54 subunit of GARP complex.
    
 0.983
ENSEBUP00000024541
VPS53 subunit of GARP complex.
    
 0.983
ENSEBUP00000023420
VPS52 subunit of GARP complex.
    
 0.961
ENSEBUP00000003434
THO complex 6.
    
 0.671
ENSEBUP00000018640
Si:ch211-225b10.4.
      
 0.594
ENSEBUP00000010495
Syntaxin 6.
      
 0.519
ENSEBUP00000012086
Brix domain containing 2.
      
 0.519
ENSEBUP00000008146
Cullin 4B.
    
 0.514
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.