STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000008746D-aminoacyl-tRNA deacylase 2. (131 aa)    
Predicted Functional Partners:
ENSEBUP00000007248
tyrosyl-tRNA synthetase 1.
     
 0.716
ENSEBUP00000020216
annotation not available
      
 0.585
ENSEBUP00000023857
HD domain containing 3.
  
    0.555
ENSEBUP00000005400
TMEM9 domain family, member B.
      
 0.523
ENSEBUP00000018459
Nucleotide binding protein-like.
  
  
 0.481
ENSEBUP00000010355
tyrosyl-tRNA synthetase 2, mitochondrial.
     
 0.467
ENSEBUP00000003156
annotation not available
      
 0.452
ENSEBUP00000016653
methionyl-tRNA synthetase 1.
   
 
 0.439
ENSEBUP00000022288
Protein phosphatase 6, catalytic subunit.
   
 
 0.436
ENSEBUP00000012487
Adenosylmethionine decarboxylase 1.
      
 0.422
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.