STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000009190CDK5 regulatory subunit associated protein 1. (598 aa)    
Predicted Functional Partners:
ENSEBUP00000025777
Exosome component 3.
    
 
 0.923
ENSEBUP00000000011
Exosome component 5.
   
   0.896
ENSEBUP00000001959
Uroporphyrinogen decarboxylase.
    
 0.713
ENDOV
Endonuclease V.
    
 0.713
ENSEBUP00000020522
Cysteine-rich with EGF-like domains 2.
      
 0.556
ENSEBUP00000020777
tRNA isopentenyltransferase 1.
  
  
 0.526
ENSEBUP00000007248
tyrosyl-tRNA synthetase 1.
  
  
 0.523
ENSEBUP00000025188
NADH:ubiquinone oxidoreductase subunit A8.
      
 0.523
ENSEBUP00000014848
annotation not available
  
  
 0.513
ENSEBUP00000026111
annotation not available
  
  
 0.513
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.