STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000009843annotation not available (180 aa)    
Predicted Functional Partners:
ENSEBUP00000012268
VPS18 core subunit of CORVET and HOPS complexes.
   
 0.962
ENSEBUP00000026584
VPS39 subunit of HOPS complex.
   
 0.960
ENSEBUP00000011612
VPS11 core subunit of CORVET and HOPS complexes.
   
 0.958
ENSEBUP00000001967
VPS41 subunit of HOPS complex.
    
 0.956
ENSEBUP00000005180
Transforming growth factor, beta receptor associated protein 1.
   
 0.948
ENSEBUP00000022885
Vacuolar protein sorting 16 homolog.
   
 0.939
ENSEBUP00000003114
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
   
 0.921
ENSEBUP00000009142
annotation not available
 
      0.899
ENSEBUP00000003279
annotation not available
   
 0.897
ENSEBUP00000003965
Synaptobrevin-like 1.
    
 0.884
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (26%) [HD]