STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000009957Ribosomal protein S25. (130 aa)    
Predicted Functional Partners:
ENSEBUP00000000630
Ribosomal protein L13.
   
 0.999
ENSEBUP00000000813
Ribosomal protein L10.
   
 0.999
ENSEBUP00000000867
Ribosomal protein L5b.
   
 0.999
ENSEBUP00000001118
Ribosomal protein L34.
   
 0.999
ENSEBUP00000001184
Ribosomal protein L32.
   
 0.999
ENSEBUP00000001661
Ribosomal protein L36.
   
 0.999
ENSEBUP00000001803
Ribosomal protein L27.
   
 0.999
ENSEBUP00000002135
annotation not available
   
 0.999
ENSEBUP00000002544
Ribosomal protein S24.
   
 0.999
ENSEBUP00000002939
annotation not available
   
 0.999
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.