STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (394 aa)    
Predicted Functional Partners:
ENSEBUP00000013994
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
ENSEBUP00000003700
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.998
ENSEBUP00000013678
SAGA complex associated factor 29.
    
 0.998
ENSEBUP00000022983
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.998
ENSEBUP00000027145
annotation not available
    
 0.998
ENSEBUP00000001478
annotation not available
    
 0.997
ENSEBUP00000006440
K(lysine) acetyltransferase 2B.
    
 0.997
ENSEBUP00000027495
annotation not available
    
 0.997
ENSEBUP00000009226
Ubiquitin specific peptidase 22.
    
 0.996
ENSEBUP00000021533
Transcriptional adaptor 2A.
    
 0.996
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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