STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000010627annotation not available (880 aa)    
Predicted Functional Partners:
ENSEBUP00000004971
annotation not available
    
 0.907
ENSEBUP00000025928
annotation not available
    
 0.907
ENSEBUP00000008209
methyl-CpG binding domain protein 2.
   
 0.871
ENSEBUP00000017743
annotation not available
   
 0.871
ENSEBUP00000023050
annotation not available
    
 0.836
ENSEBUP00000013154
Chromodomain helicase DNA binding protein 3.
   
 0.833
ENSEBUP00000020482
Chromodomain helicase DNA binding protein 4a.
   
 0.833
ENSEBUP00000006279
Histone deacetylase 3.
    
 0.804
ENSEBUP00000010728
Histone deacetylase 8.
    
 0.804
ENSEBUP00000011543
annotation not available
    
 0.804
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.