STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000010713annotation not available (391 aa)    
Predicted Functional Partners:
ENSEBUP00000008874
Nucleolar protein 6 (RNA-associated).
    
 0.813
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.810
ENSEBUP00000000924
Bystin-like.
    
 0.807
ENSEBUP00000027302
annotation not available
   
  0.805
ENSEBUP00000012217
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10.
    
 0.792
ENSEBUP00000007166
NOP14 nucleolar protein homolog (yeast).
    
  0.781
ENSEBUP00000014216
UTP25 small subunit processor component.
    
   0.732
ENSEBUP00000016042
Nucleolar protein with MIF4G domain 1.
    
   0.732
ENSEBUP00000025443
UTP3 small subunit processome component.
    
   0.732
ENSEBUP00000009760
annotation not available
    
  0.686
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.