STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000010920annotation not available (1058 aa)    
Predicted Functional Partners:
ENSEBUP00000014100
Integrin, beta 4.
   
 0.821
ENSEBUP00000010354
annotation not available
    
 0.810
ENSEBUP00000003208
Integrin, beta 6.
   
 0.785
ENSEBUP00000013733
annotation not available
    
 0.737
TNC
Tenascin C.
    
 0.737
ENSEBUP00000023605
annotation not available
    
 0.737
TNC-2
Tenascin C.
    
 0.737
ENSEBUP00000024579
annotation not available
    
 0.737
ITGB1
Integrin subunit beta 1.
   
 0.727
ITGB1-2
Integrin subunit beta 1.
   
 0.727
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.