STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000012406annotation not available (1691 aa)    
Predicted Functional Partners:
ENSEBUP00000001417
annotation not available
   
 0.996
ENSEBUP00000014441
Calcium channel, voltage-dependent, gamma subunit 6b.
   
 0.825
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.760
CACNA2D2-2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.760
ENSEBUP00000007395
Calcium channel, voltage dependent, alpha2/delta subunit 3.
   
 0.754
ENSEBUP00000022838
Calmodulin-like 4b.
    
 0.702
ENSEBUP00000000259
annotation not available
    
 0.689
ENSEBUP00000003966
annotation not available
    
 0.689
ENSEBUP00000024646
annotation not available
    
 0.689
ENSEBUP00000025850
annotation not available
    
 0.689
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.