STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000013236Cathepsin Ba. (328 aa)    
Predicted Functional Partners:
ENSEBUP00000001327
Cathepsin F.
  
0.924
ENSEBUP00000010360
Ribosomal protein S14.
   
 0.866
ENSEBUP00000005165
Cathepsin A.
   
 0.861
ENSEBUP00000010550
Cathepsin A.
   
 0.861
ENSEBUP00000020578
Cathepsin O.
  
0.853
ENSEBUP00000006195
annotation not available
   
 0.829
ENSEBUP00000012227
annotation not available
   
 0.829
ENSEBUP00000019990
annotation not available
   
 0.829
ENSEBUP00000021009
annotation not available
   
 0.829
ENSEBUP00000024393
annotation not available
   
 0.829
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.