STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000013510annotation not available (146 aa)    
Predicted Functional Partners:
ENSEBUP00000017122
Lysine (K)-specific demethylase 6A.
   
 0.948
ENSEBUP00000021609
H2A.Z variant histone 2a.
   
 0.907
ENSEBUP00000021851
Chromodomain protein, Y-like.
   
 0.878
ENSEBUP00000026424
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.874
ENSEBUP00000000501
annotation not available
    
 0.867
ENSEBUP00000012444
annotation not available
    
 0.867
ENSEBUP00000013469
annotation not available
    
 0.867
ENSEBUP00000018791
annotation not available
    
 0.867
ENSEBUP00000012301
Histone acetyltransferase 1.
    
 0.846
ENSEBUP00000012664
Zgc:163040.
 
 
 0.839
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.