STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000013928SNF8 subunit of ESCRT-II. (273 aa)    
Predicted Functional Partners:
ENSEBUP00000016008
Vacuolar protein sorting 25 homolog.
   
 0.999
ENSEBUP00000020935
annotation not available
   
 0.999
ENSEBUP00000001385
Charged multivesicular body protein 6a.
    
 0.996
ENSEBUP00000002391
Chromosome 17 open reading frame 75.
    
 0.985
ENSEBUP00000017864
Transmembrane 9 superfamily member 1.
    
 0.984
ENSEBUP00000024328
Transmembrane 9 superfamily member 1.
    
 0.984
ENSEBUP00000004965
VPS28 subunit of ESCRT-I.
   
 0.966
ENSEBUP00000026017
Adenosine kinase a.
    
 0.962
ENSEBUP00000002380
Charged multivesicular body protein 3.
    
 0.955
ENSEBUP00000000560
annotation not available
    
 0.951
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.