STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000015817Ubiquitin-conjugating enzyme E2E 1. (230 aa)    
Predicted Functional Partners:
ENSEBUP00000006872
annotation not available
   
 0.892
ENSEBUP00000004699
annotation not available
   
 0.888
ENSEBUP00000008565
annotation not available
   
 0.888
ENSEBUP00000011534
annotation not available
    
 0.875
ENSEBUP00000007071
annotation not available
    
 0.865
ENSEBUP00000024107
annotation not available
    
 0.865
ENSEBUP00000026872
annotation not available
   
 0.846
ENSEBUP00000015996
RAN binding protein 2.
    
 0.840
ENSEBUP00000006921
OTU deubiquitinase, ubiquitin aldehyde binding 1a.
    
 0.814
ENSEBUP00000014895
annotation not available
   
 0.791
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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