STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000016065Microspherule protein 1. (426 aa)    
Predicted Functional Partners:
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.979
ENSEBUP00000010198
KAT8 regulatory NSL complex subunit 3.
   
 0.973
ENSEBUP00000010605
KAT8 regulatory NSL complex subunit 2.
   
 0.965
ENSEBUP00000000442
INO80 complex subunit E.
    
 0.959
ENSEBUP00000006783
WD repeat domain 5.
    
 0.954
ENSEBUP00000018747
annotation not available
    
 0.952
ENSEBUP00000017900
INO80 complex subunit C.
   
 0.947
ENSEBUP00000003640
Actin related protein 5.
    
 0.940
ENSEBUP00000004559
Actin related protein 8.
    
 0.940
ENSEBUP00000009420
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
     
 0.936
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.