STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000016199Autophagy related 101. (219 aa)    
Predicted Functional Partners:
ENSEBUP00000005012
ATG13 autophagy related 13 homolog (S. cerevisiae).
    
 0.999
ENSEBUP00000006659
annotation not available
    
 0.974
ENSEBUP00000013284
Unc-51 like autophagy activating kinase 1.
    
 0.974
ENSEBUP00000000636
Beclin 1, autophagy related.
    
 0.938
ENSEBUP00000006238
WD repeat domain 41.
    
 0.935
ENSEBUP00000015633
Autophagy related 14.
    
 0.933
ENSEBUP00000002422
annotation not available
    
 0.921
ENSEBUP00000014953
annotation not available
    
 0.921
ENSEBUP00000023312
annotation not available
    
 0.921
ENSEBUP00000002284
Phosphoinositide-3-kinase, regulatory subunit 4.
     
 0.914
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.