STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000016220GPN-loop GTPase 1. (436 aa)    
Predicted Functional Partners:
ENSEBUP00000010731
GPN-loop GTPase 2.
    
 
0.979
ENSEBUP00000014609
annotation not available
    
 
 0.976
ENSEBUP00000027841
annotation not available
   
 
0.976
ENSEBUP00000026402
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.962
ENSEBUP00000005692
annotation not available
   
 
 0.911
ENSEBUP00000016908
annotation not available
   
 
 0.911
ENSEBUP00000016164
Polymerase (RNA) II (DNA directed) polypeptide E, b.
   
 
 0.902
ENSEBUP00000000221
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 
 0.892
POLR1C
RNA polymerase I and III subunit C.
   
 
 0.866
ENSEBUP00000026130
Polymerase (RNA) II (DNA directed) polypeptide J.
    
 
 0.860
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.