STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XPAXPA, DNA damage recognition and repair factor. (458 aa)    
Predicted Functional Partners:
ENSEBUP00000014448
Excision repair cross-complementation group 4.
    
 0.996
ENSEBUP00000021013
Excision repair cross-complementation group 2.
    
 0.996
ENSEBUP00000008920
Excision repair cross-complementation group 6.
    
 0.994
ENSEBUP00000015510
Excision repair cross-complementation group 3.
    
 0.992
ENSEBUP00000007071
annotation not available
    
 0.991
ENSEBUP00000024107
annotation not available
    
 0.991
ENSEBUP00000005658
Excision repair cross-complementation group 1.
    
 0.989
ENSEBUP00000004704
General transcription factor IIH, polypeptide 1.
    
 0.986
ENSEBUP00000013664
annotation not available
    
 0.982
ENSEBUP00000003438
Replication protein A2.
    
 0.981
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.