STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000016413Solute carrier family 1 member 1. (342 aa)    
Predicted Functional Partners:
ENSEBUP00000000871
Solute carrier family 1 member 2a.
  
  
 
0.806
ENSEBUP00000022548
Solute carrier family 1 member 7b.
  
  
 
0.783
ENSEBUP00000000949
Solute carrier family 6 member 2.
    
 0.721
ENSEBUP00000009592
Solute carrier family 6 member 4b.
    
 0.721
ENSEBUP00000023257
Solute carrier family 6 member 2.
    
 0.721
ENSEBUP00000018667
annotation not available
    
 0.645
ENSEBUP00000019099
Aldehyde dehydrogenase 7 family, member A1.
   
 
 0.514
ENSEBUP00000008002
Solute carrier family 3 member 1.
  
 
 0.486
ENSEBUP00000000252
Ras homolog family member J.
    
 0.485
ENSEBUP00000027681
Ras homolog family member Q.
    
 0.485
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.