STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000016656annotation not available (593 aa)    
Predicted Functional Partners:
ENSEBUP00000015773
annotation not available
    
 0.769
ENSEBUP00000022754
annotation not available
    
 0.769
ENSEBUP00000001478
annotation not available
    
 0.627
ENSEBUP00000027495
annotation not available
    
 0.627
ENSEBUP00000013994
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.491
ENSEBUP00000003961
Tumor necrosis factor, alpha-induced protein 6.
    
 0.490
ENSEBUP00000022983
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.490
ENSEBUP00000026554
Tumor necrosis factor, alpha-induced protein 6.
    
 0.490
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
  0.488
ENSEBUP00000003700
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.485
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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