ENSEBUP00000017066 protein (Eptatretus burgeri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSEBUP00000017066

annotation not available (279 aa)

Predicted Functional Partners:

ENSEBUP00000006538

0.499

ENSEBUP00000001122

0.493

ENSEBUP00000002465

0.486

ENSEBUP00000027576

0.463

ENSEBUP00000026045

0.461

ENSEBUP00000007051

0.441

ENSEBUP00000004082

0.426

ENSEBUP00000006917

0.420

ENSEBUP00000016566

0.409

ENSEBUP00000006709

0.400

Your Current Organism:

Eptatretus burgeri

NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSEBUP00000001122	ENSEBUP00000017066	annotation not available	annotation not available	0.493
ENSEBUP00000001122	ENSEBUP00000027576	annotation not available	annotation not available	0.418
ENSEBUP00000002465	ENSEBUP00000004082	annotation not available	annotation not available	0.402
ENSEBUP00000002465	ENSEBUP00000007051	annotation not available	annotation not available	0.432
ENSEBUP00000002465	ENSEBUP00000017066	annotation not available	annotation not available	0.486
ENSEBUP00000002465	ENSEBUP00000026045	annotation not available	annotation not available	0.474
ENSEBUP00000002465	ENSEBUP00000027576	annotation not available	annotation not available	0.502
ENSEBUP00000004082	ENSEBUP00000002465	annotation not available	annotation not available	0.402
ENSEBUP00000004082	ENSEBUP00000017066	annotation not available	annotation not available	0.426
ENSEBUP00000006538	ENSEBUP00000016566	annotation not available	annotation not available	0.411
ENSEBUP00000006538	ENSEBUP00000017066	annotation not available	annotation not available	0.499
ENSEBUP00000006538	ENSEBUP00000026045	annotation not available	annotation not available	0.440
ENSEBUP00000006538	ENSEBUP00000027576	annotation not available	annotation not available	0.455
ENSEBUP00000006709	ENSEBUP00000007051	annotation not available	annotation not available	0.498
ENSEBUP00000006709	ENSEBUP00000017066	annotation not available	annotation not available	0.400
ENSEBUP00000006917	ENSEBUP00000017066	annotation not available	annotation not available	0.420
ENSEBUP00000007051	ENSEBUP00000002465	annotation not available	annotation not available	0.432
ENSEBUP00000007051	ENSEBUP00000006709	annotation not available	annotation not available	0.498
ENSEBUP00000007051	ENSEBUP00000017066	annotation not available	annotation not available	0.441
ENSEBUP00000016566	ENSEBUP00000006538	annotation not available	annotation not available	0.411