STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000017448annotation not available (665 aa)    
Predicted Functional Partners:
ENSEBUP00000026424
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.996
ENSEBUP00000018803
annotation not available
   
 0.935
ENSEBUP00000012221
Structure specific recognition protein 1a.
   
 0.924
ENSEBUP00000010707
SPT4 homolog, DSIF elongation factor subunit.
    
 0.914
CDC73
Cell division cycle 73.
   
 0.894
ENSEBUP00000026916
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.882
ENSEBUP00000004241
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.868
ENSEBUP00000000221
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.803
ENSEBUP00000016164
Polymerase (RNA) II (DNA directed) polypeptide E, b.
    
 0.794
ENSEBUP00000012005
annotation not available
    
 0.782
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.