STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000017592GTP binding protein 2b. (605 aa)    
Predicted Functional Partners:
ENSEBUP00000005791
CoA synthase.
      
 0.605
ENSEBUP00000005660
Mitochondrial ribosome recycling factor.
      
 0.592
ENSEBUP00000007611
Pelota mRNA surveillance and ribosome rescue factor.
    
 
 0.558
ENSEBUP00000000536
Ddb1 and cul4 associated factor 17.
      
 0.526
ENSEBUP00000017224
HBS1-like translational GTPase.
      
0.444
ENSEBUP00000017398
annotation not available
      
 0.440
ENSEBUP00000017303
annotation not available
      
 0.416
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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